Daily Respiratory Research Analysis
Analyzed 151 papers and selected 3 impactful papers.
Summary
Three impactful respiratory papers span translational therapeutics, AI-enabled imaging, and acute respiratory care. A mechanistic study shows that intranasal delivery of a circular RNA (circMFN2) targeting the IGF2BP3–PDK4 axis reverses pulmonary hypertension in mice. An open-source chest CT foundation model (TANGERINE) trained on >98,000 LDCT scans enables efficient, generalizable detection of lung diseases, while a prospective crossover trial demonstrates that 4 mg intranasal naloxone rapidly restores ventilation after fentanyl/sufentanil-induced respiratory depression but incompletely normalizes CO2.
Research Themes
- Metabolic reprogramming and RNA therapeutics in pulmonary hypertension
- Open-source foundation models for low-dose chest CT in screening and respiratory disease
- Optimization of intranasal naloxone for opioid-induced respiratory depression
Selected Articles
1. circMFN2 Regulates the IGF2BP3-PDK4 to Ameliorate Pulmonary Hypertension.
This translational study identifies circMFN2 as a hypoxia-responsive regulator that binds IGF2BP3 to prevent stabilization of PDK4 mRNA, normalizing mitochondrial metabolism in pulmonary artery smooth muscle cells. Intranasal delivery of R8-circMFN2 in Sugen/hypoxia mice improved hemodynamics and reduced vascular remodeling, highlighting a noninvasive circular RNA-based therapeutic avenue in pulmonary hypertension.
Impact: First demonstration that a circular RNA delivered intranasally can reverse pulmonary vascular remodeling by targeting the IGF2BP3–PDK4 metabolic axis, opening a mechanistically precise, noninvasive therapeutic strategy.
Clinical Implications: Identifies PDK4 and the IGF2BP3–PDK4 interaction as actionable metabolic targets in PH and supports development of intranasal circRNA therapeutics; requires safety, dosing, and durability evaluation in large-animal models and early-phase trials.
Key Findings
- circMFN2 is downregulated in PH and its overexpression attenuates hypoxia-induced PASMC proliferation, migration, and mitochondrial dysfunction.
- circMFN2 binds IGF2BP3 to block stabilization of PDK4 mRNA, limiting PDK4-driven metabolic reprogramming, reducing ROS, and restoring oxidative phosphorylation.
- Intranasal R8-circMFN2 in Sugen/hypoxia PH mice improved pulmonary hemodynamics and reduced vascular remodeling with concomitant PDK4 downregulation.
Methodological Strengths
- Multi-system validation across human PASMCs and in vivo Sugen/hypoxia mouse model.
- Mechanistic dissection with RNA–protein interaction assays and mitochondrial functional profiling; therapeutic delivery tested via intranasal route.
Limitations
- Preclinical study without human interventional data; long-term safety and off-target effects of intranasal circRNA are unknown.
- Sample sizes and dosing regimens for durability/toxicity not fully characterized; translation to diverse PH etiologies untested.
Future Directions: Evaluate pharmacokinetics, biodistribution, and safety of intranasal circRNA in large animals; test efficacy across PH etiologies; develop biomarkers (PDK4 axis) and progress to phase I trials.
BACKGROUND: Circular RNAs have emerged as key regulators of vascular remodeling and promising therapeutic targets, yet their specific contributions to pulmonary hypertension (PH) remain largely unknown. METHODS: We identified a PH-related circular RNA, circMFN2, generated from the MFN2 (mitofusin-2) locus, which was significantly downregulated in the peripheral blood of patients with PH and in pulmonary arteries of Sugen/hypoxia-induced PH mice. Functional studies were performed in human pulmonary artery smooth muscle cells under hypoxic conditions and in Sugen/hypoxia mice treated intranasally with R8-circMFN2 (R8-peptide-modified liposomal circMFN2). Transcriptomic profiling, RNA-protein interaction assays, and mitochondrial function analyses were used to define the downstream mechanisms. RESULTS: circMFN2 overexpression significantly attenuated hypoxia-induced human pulmonary artery smooth muscle cell proliferation, migration, and mitochondrial dysfunction. RNA sequencing after circMFN2 knockdown revealed activation of gene networks associated with respiratory system diseases. Mechanistically, circMFN2 directly bound the RNA-binding protein IGF2BP3 (insulin-like growth factor 2 mRNA-binding protein 3), thereby blocking its stabilization of PDK4 (pyruvate dehydrogenase kinase 4) mRNA. This circMFN2-IGF2BP3-PDK4 regulatory axis limited PDK4-mediated metabolic reprogramming, restored mitochondrial fusion, reduced reactive oxygen species, and normalized oxidative phosphorylation. In Sugen/hypoxia mice, therapeutic intranasal delivery of R8-circMFN2 significantly improved pulmonary hemodynamics, reduced vascular remodeling, and downregulated PDK4 expression. CONCLUSIONS: circMFN2 functions as a hypoxia-responsive regulator that preserves mitochondrial homeostasis by restraining the IGF2BP3-PDK4 axis. Intranasal delivery of R8-circMFN2 establishes a translational potential for noninvasive circular RNA-based therapy to reverse pulmonary vascular remodeling and hemodynamic impairment in PH.
2. A computationally frugal, open-source chest CT foundation model for thoracic disease detection in lung cancer screening programmes.
TANGERINE is an open-source, self-supervised, 3D masked autoencoder foundation model pretrained on >98,000 LDCT scans that fine-tunes rapidly with limited data and compute. It delivers robust performance across 14 thoracic disease tasks and generalizes across centres, enabling scalable LDCT analysis for both cancer and non-cancer lung diseases.
Impact: Provides a widely accessible foundation model that can democratize LDCT interpretation and extend screening programs beyond cancer to broader respiratory disease detection with minimal computational costs.
Clinical Implications: May alleviate radiologist bottlenecks in LDCT programs, support multi-disease case finding (e.g., emphysema, fibrosis), and enable deployment in resource-limited settings; prospective clinical validation and workflow integration are the next steps.
Key Findings
- Pretrained on >98,000 LDCT scans (UK LCS initiative plus 27 public datasets) using a 3D masked autoencoder.
- Achieves comparable or superior performance with a fraction of fine-tuning data and GPU time versus training from scratch.
- Demonstrates strong, robust generalization across 14 disease classification tasks and multiple clinical centres.
Methodological Strengths
- Large-scale, diverse pretraining corpus with open-source release and transparent architecture.
- Systematic multi-dataset benchmarking demonstrating compute/data efficiency and cross-centre generalization.
Limitations
- Retrospective evaluation without prospective clinical impact assessment or randomized reader studies.
- Fairness, domain shift resilience, and calibration across demographics and scanners require further testing.
Future Directions: Prospective deployment studies with clinical endpoints, reader-assist trials, fairness auditing, and integration into screening workflows; expansion to detection/segmentation and longitudinal analysis.
BACKGROUND: Low-dose computed tomography (LDCT) employed in lung cancer screening (LCS) programmes is increasing in uptake worldwide. LCS programmes herald a generational opportunity to simultaneously detect cancer and non-cancer-related early-stage lung disease, yet these efforts are hampered by a shortage of radiologists to interpret scans at scale. Here, we present TANGERINE, a computationally frugal, open-source vision foundation model for volumetric LDCT analysis. METHODS: Designed for broad accessibility and rapid adaptation, TANGERINE can be fine-tuned off the shelf for a wide range of disease-specific tasks with limited computational resources and training data. The model is pretrained using self-supervised learning on more than 98,000 thoracic LDCT scans, including the United Kingdom's largest LCS initiative to date and 27 public datasets. By extending a masked autoencoder framework to three-dimensional imaging, TANGERINE provides a scalable solution for LDCT analysis, combining architectural simplicity, public availability, and modest computational requirements. RESULTS: TANGERINE demonstrates superior computational and data efficiency in a retrospective multi-dataset analysis: it converges rapidly during fine-tuning, requiring significantly fewer graphics processing unit hours than models trained from scratch, and achieves comparable or superior performance using only a fraction of the fine-tuning data. The model achieves strong performance across 14 disease classification tasks, including lung cancer and multiple respiratory diseases, and generalises robustly across diverse clinical centres. CONCLUSIONS: TANGERINE's accessible, open-source, lightweight design lays the foundation for rapid integration into next-generation medical imaging tools, enabling lung cancer screening programmes to pivot from a singular focus on lung cancer detection toward comprehensive respiratory disease management in high-risk populations.
3. Intranasal naloxone reversal of opioid-induced respiratory depression in opioid-naïve individuals and self-reported daily opioid users.
In a prospective crossover study, 4 mg intranasal naloxone rapidly restored minute ventilation within 2–4 minutes in both opioid-naïve individuals and daily users after fentanyl or sufentanil-induced steady-state respiratory depression. However, end-tidal pCO2 recovery lagged (11–17 minutes) and was sometimes incomplete, particularly with the higher-affinity opioid sufentanil, indicating the potential need for repeat or higher dosing and vigilant monitoring.
Impact: Offers rigorous human physiologic evidence on endpoint-specific efficacy of intranasal naloxone against potent synthetic opioids, informing dose strategies and monitoring protocols during overdose response.
Clinical Implications: Supports immediate use of 4 mg intranasal naloxone to rapidly restore ventilation but underscores the need to monitor CO2 and consider repeat dosing or higher-dose formulations, especially with sufentanil exposure or high opioid burden.
Key Findings
- Minute ventilation recovered within 2–4 minutes after 4 mg intranasal naloxone in both opioid-naïve and daily users during fentanyl/sufentanil-induced respiratory depression.
- End-tidal pCO2 recovery was delayed (11–17 minutes) and sometimes incomplete, particularly with sufentanil; V̇E and pCO2 exhibited distinct hysteresis (0–1 vs. 2–11 minutes).
- Withdrawal limited repeat participation among daily users, and continuous infusion conditions differ from real-world overdoses.
Methodological Strengths
- Prospective crossover design with objective ventilatory and capnographic endpoints.
- Inclusion of both opioid-naïve and daily users; pharmacodynamic hysteresis analysis across fentanyl and higher-affinity sufentanil.
Limitations
- Small sample size; continuous opioid infusion model differs from typical bolus overdoses.
- Not randomized and some participant dropout due to withdrawal symptoms among daily users.
Future Directions: Evaluate optimal dosing (repeat/higher dose), device/formulations, and real-world effectiveness against illicit opioid mixtures; develop protocols coupling ventilation monitoring with naloxone titration.
BACKGROUND: Since current opioid overdose deaths occur mainly from potent synthetic opioids with high affinity for the opioid receptor, such as fentanyl and carfentanil, it is important to determine the efficacy of naloxone, particularly the intranasal formulation, in reversing opioid-induced respiratory depression. This study evaluated effectiveness of 4 mg intranasal naloxone (Narcan®) in reversing moderate respiratory depression induced by fentanyl and sufentanil, in opioid-naïve individuals and self-reported daily opioid users. Sufentanil was compared to fentanyl because of its higher affinity for the opioid receptor than fentanyl. METHODS: In this prospective, crossover trial, 12 opioid-naïve individuals and 18 daily opioid users (morphine milligram equivalent of 291 (range 60-2250 mg/day) received continuous fentanyl or sufentanil infusions, titrated to achieve 30-40% reduction in ventilation (V̇E). Participants were administered Narcan® during steady-state respiratory depression. Primary endpoints included time to reversal of diminished V̇E and elevated end-tidal carbon dioxide concentration (pCO2). RESULTS: Narcan® restored V̇E within 2-4 min across all participants but showed delayed reversal of end-tidal pCO2 (11-17 min), with pCO2 recovery during sufentanil exposure in just 8 opioid-naïve individuals and 10 daily opioid users. Hysteresis analysis showed for V̇E-reversal onset/offset time (blood-effect-site equilibration half-life) of 0-1 min and end-tidal pCO2 2-11 min. Because of withdrawal symptoms, seven of eighteen daily opioid users participated once in the study. Study limitations included continuous opioid infusions that do not occur in real-world overdose settings. CONCLUSION: A single Narcan® dose reversed moderate fentanyl- and sufentanil-induced respiratory depression, though effectiveness varied by endpoint and opioid receptor affinity. Rapid V̇E-recovery suggests clinical utility of intranasal naloxone, but delayed and sometimes incomplete recovery of end-tidal pCO2, particularly during exposure to the high-affinity opioid sufentanil, indicating reversal inefficacy and persistence of respiratory instability. Further studies are needed to address optimal naloxone doses and alternative formulations to address high-dose potent opioid threats.