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pyAKI-An open source solution to automated acute kidney injury classification.

PloS one2025-01-03PubMed
Total: 76.0Innovation: 8Impact: 7Rigor: 7Citation: 9

Summary

pyAKI standardizes KDIGO-based AKI classification from ICU time-series using a reproducible data model and dual-input algorithm (serum creatinine and urine output). Validated against expert annotations on MIMIC-IV, it achieved perfect accuracy across categories, offering the first open-source, end-to-end solution for consistent AKI labeling.

Key Findings

  • First open-source, standardized pipeline implementing KDIGO AKI criteria on ICU time-series.
  • Validated on MIMIC-IV subset with accuracy of 1.0 versus expert annotations across all categories.
  • Implements a reproducible data model using serum creatinine and urine output.

Clinical Implications

While a research tool, pyAKI can underpin robust decision-support, audit, and quality-improvement pipelines in perioperative and critical care settings where AKI is common.

Why It Matters

By eliminating inconsistent edge-case interpretations and offering code/data transparency, pyAKI can harmonize AKI endpoints across studies, boosting reproducibility and enabling multicenter perioperative/ICU research.

Limitations

  • Validation on a subset of a single database (MIMIC-IV) may limit generalizability without multicenter testing
  • Clinical impact on outcomes not assessed; tool performance in noisy real-time streams unproven

Future Directions

Benchmark across diverse EHRs and institutions, integrate into real-time clinical decision-support, and extend to AKI staging/trajectory prediction using probabilistic or ML approaches.

Study Information

Study Type
Methodological study (tool development/validation)
Research Domain
Diagnosis
Evidence Level
III - Retrospective validation against expert labels using observational ICU database.
Study Design
OTHER