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Daily Report

Daily Sepsis Research Analysis

07/01/2025
3 papers selected
3 analyzed

Three high-impact sepsis studies advanced mechanistic understanding and translational therapy. A mechanistic study uncovered an Acod1/itaconate–UBR5–PAD4 axis that suppresses NETosis, a primate trial showed factor XI inhibition (abelacimab) improved survival without bleeding, and a preclinical study identified narciclasine as a dual-action cardioprotective agent via BNIP3-mediated mitophagy and ferroptosis suppression.

Summary

Three high-impact sepsis studies advanced mechanistic understanding and translational therapy. A mechanistic study uncovered an Acod1/itaconate–UBR5–PAD4 axis that suppresses NETosis, a primate trial showed factor XI inhibition (abelacimab) improved survival without bleeding, and a preclinical study identified narciclasine as a dual-action cardioprotective agent via BNIP3-mediated mitophagy and ferroptosis suppression.

Research Themes

  • Targeting immunothrombosis/coagulation in sepsis
  • Metabolic-ubiquitin regulation of NETosis
  • Mitochondrial quality control and ferroptosis in septic cardiomyopathy

Selected Articles

1. Acod1 Promotes PAD4 Ubiquitination via UBR5 Alkylation to Modulate NETosis and Exert Protective Effects in Sepsis.

81.5Level VCase-control
Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025PMID: 40586264

Using patient samples and CLP mouse models, the study identifies a metabolic-ubiquitin axis wherein Acod1/itaconate alkylates and activates UBR5 to promote K48-linked ubiquitination and degradation of PAD4, thereby suppressing NETosis. Acod1 knockout worsened inflammation, organ injury, and survival, positioning the Acod1–UBR5–PAD4 axis as a therapeutic target in sepsis.

Impact: Reveals a previously unrecognized mechanism linking immunometabolism to NETosis control in sepsis, identifying druggable nodes (UBR5, PAD4).

Clinical Implications: Suggests a strategy to modulate NETosis by boosting Acod1/itaconate signaling or directly targeting UBR5–PAD4 interactions, which could reduce tissue injury in sepsis.

Key Findings

  • NET levels were elevated in sepsis patients and CLP mice and correlated with Acod1 expression.
  • Acod1 knockout increased NETosis, inflammation, organ injury, and mortality in CLP sepsis.
  • Acod1/itaconate alkylated and enhanced UBR5, promoting K48-linked ubiquitination and degradation of PAD4, thereby suppressing NETosis.

Methodological Strengths

  • Integrated multi-omics with genetic knockouts and in vivo validation
  • Mechanistic mapping using co-immunoprecipitation and functional assays

Limitations

  • Preclinical models may not fully recapitulate human sepsis heterogeneity
  • Pharmacologic modulations of itaconate/UBR5 require translational dosing and safety data

Future Directions: Evaluate pharmacologic activators/inhibitors of the Acod1–UBR5–PAD4 axis in diverse sepsis models and assess NET-targeted modulation in early-phase clinical studies.

Neutrophil extracellular traps (NETs) are reticular structures released by neutrophils, and the process of their formation is called NETosis. NETs play a key role in the pathological process of sepsis. However, the specific regulatory mechanism has not been fully clarified. This study finds that the levels of NETs in peripheral blood are significantly elevated in clinical sepsis patients and cecal ligation and puncture (CLP) mouse models, and the expression of Acod1 is closely related to the generation of NETs. Acod1 knockout led to a further increase in NETs levels in CLP mice, aggravated the inflammatory response, worsened organ damage, and reduced the survival rate. Further studies indicate that E3 ubiquitin ligase UBR5 interacts with PAD4 (one of the core proteins for NETs generation). Acod1/itaconate (ITA) enhanced the enzymatic activity of UBR5 through alkylation modification, promoting the K48-linked polyubiquitination and degradation of PAD4, thereby inhibiting NETosis. In conclusion, this study combines transcriptomics, metabolomics, genetic engineering, and co-immunoprecipitation techniques to reveal the molecular mechanism of Acod1/ITA in regulating NETs, providing new potential targets and theoretical basis for the treatment of sepsis.

2. Protective effects of factor XI inhibition by abelacimab in a baboon model of live Staphylococcus aureus sepsis.

74.5Level VRCT
Journal of thrombosis and haemostasis : JTH · 2025PMID: 40582699

In a randomized baboon model of live S. aureus sepsis, abelacimab (FXI inhibitor) achieved 100% 7-day survival versus 50% mortality in controls, attenuated coagulopathy without bleeding, and reduced inflammatory and endothelial injury signatures. Proteomics supported modulation of coagulation, inflammation, and tissue injury pathways.

Impact: Provides translational evidence in a nonhuman primate model that targeting FXI can improve survival while avoiding bleeding—directly informing clinical development of anticoagulant strategies in sepsis.

Clinical Implications: Supports evaluating FXI inhibitors (e.g., abelacimab) in early-phase sepsis trials to mitigate immunothrombosis and organ failure with a favorable bleeding profile.

Key Findings

  • Abelacimab-treated baboons had 100% 7-day survival; 3/6 controls died within 102 hours.
  • FXI inhibition attenuated sepsis-induced coagulopathy without bleeding signs.
  • Treatment reduced proinflammatory cytokines, neutrophil activation, and preserved endothelial integrity; proteomics showed broad pathway modulation.

Methodological Strengths

  • Randomized nonhuman primate model with clinically relevant live-pathogen sepsis
  • Multimodal assessment including coagulation, inflammation, endothelial markers, pathology, and proteomics

Limitations

  • Small sample size and single-pathogen model limit generalizability
  • Preclinical design; dosing/timing and efficacy across heterogeneous human sepsis remain to be defined

Future Directions: Dose-finding and safety studies of FXI inhibition in early human sepsis, and evaluation across diverse pathogens and comorbidity profiles.

BACKGROUND: Sepsis remains a major clinical challenge characterized by dysregulated immune response, coagulation abnormalities, and multiorgan failure, leading to high morbidity and mortality. OBJECTIVES: This study investigated the therapeutic potential of abelacimab, a monoclonal antibody targeting the plasma zymogen factor (F)XI, in a new baboon model of Staphylococcus aureus sepsis. METHODS: Healthy Papio anubis baboons were randomly assigned to control or abelacimab treatment groups. Both groups (n = 6, each) were intravenously infused with a median lethal (LD RESULTS: All 6 abelacimab-treated baboons survived until the 7-day endpoint, while 3 out of 6 untreated controls succumbed to sepsis within 102 hours. Abelacimab significantly attenuated sepsis-induced coagulopathy without signs of bleeding, as evidenced by biochemical tests and pathology analysis. Treated animals exhibited decreased proinflammatory cytokines, diminished neutrophil activation, and preservation of endothelial integrity, collectively conferring robust protection against organ damage. Proteomic analysis revealed that abelacimab modulated pathways related to coagulation, inflammation, and tissue injury, contributing to improved survival outcomes. CONCLUSION: FXI inhibition by abelacimab offers significant protection by attenuating activation of coagulation, reducing inflammation, and preventing organ failure. Targeting FXI may be a promising therapeutic strategy for managing sepsis by addressing multiple facets of its complex pathophysiology.

3. Narciclasine mitigates sepsis-induced cardiac dysfunction by enhancing BNIP3-mediated mitophagy and suppressing ferroptosis.

67.5Level VCohort
Free radical biology & medicine · 2025PMID: 40581164

Narciclasine improved short-term survival and cardiac function in LPS and CLP sepsis models by suppressing ferroptosis (restoring GSH, reducing MDA, modulating TFRC/GPX4/HO-1) and enhancing BNIP3-mediated mitophagy (increased PINK1/PARK2 recruitment and LC3-ATP5B colocalization). Genetic BNIP3 loss abrogated benefits, establishing BNIP3 as a key mediator.

Impact: Introduces a dual-mechanism small molecule approach that targets ferroptosis and mitochondrial quality control for septic cardiomyopathy, with strong genetic validation.

Clinical Implications: Positions BNIP3-mediated mitophagy and ferroptosis as therapeutic axes for sepsis-related cardiac injury; narciclasine or analogs warrant pharmacokinetic and safety studies for potential translation.

Key Findings

  • Narciclasine improved 72-hour survival and restored LVEF/FS/CO in LPS and CLP sepsis models in a dose-dependent manner.
  • Reduced ferroptosis markers (iron overload, MDA) and restored glutathione; modulated TFRC, GPX4, and HO-1 expression.
  • Enhanced BNIP3-dependent mitophagy (PINK1/PARK2 recruitment, LC3-ATP5B colocalization); BNIP3 knockdown/silencing abolished benefits.

Methodological Strengths

  • Convergent validation across two in vivo models and in vitro cardiomyocytes
  • Genetic perturbation (siRNA and AAV9 BNIP3 silencing) confirming mechanism

Limitations

  • Predominantly prophylactic dosing; therapeutic window and timing remain to be defined
  • Preclinical study; human pharmacology and off-target effects are unknown

Future Directions: Define therapeutic dosing windows, assess combination strategies with standard sepsis care, and evaluate narciclasine analogs with improved pharmacology.

Sepsis-induced myocardial dysfunction (SIMD) remains a major contributor to sepsis-related mortality, driven by overwhelming inflammation, oxidative damage and impaired mitochondrial quality control. Narciclasine (Narc), a plant-derived diterpenoid, has demonstrated antioxidant and anti-inflammatory properties in various disease models. Here, we investigated whether Narc attenuates SIMD by inhibiting ferroptosis and promoting mitophagy. In both lipopolysaccharide (LPS) and cecal ligation and puncture (CLP) mouse models, prophylactic administration of Narc markedly improved 72-h survival and restored left ventricular ejection fraction (LVEF), fractional shortening (FS) and cardiac output in a dose-dependent manner. Biochemical assays revealed that SIMD hearts displayed iron overload, lipid peroxidation (elevated malondialdehyde) and glutathione depletion-hallmarks of ferroptosis-while Narc treatment replenished glutathione, reduced malondialdehyde levels, downregulated transferrin receptor (TFRC) and upregulated GPX4 and HO-1 expression. In neonatal rat cardiomyocytes challenged with LPS or the ferroptosis inducer erastin, Narc dose-dependently preserved cell viability, inhibited lipid peroxidation (BODIPY-C11 staining) and maintained intracellular glutathione. Concurrently, Narc ameliorated mitochondrial dysfunction: Seahorse analysis showed enhanced basal and maximal respiration, JC-1 staining demonstrated stabilized membrane potential, and immunofluorescence confirmed increased PINK1/PARK2 recruitment and LC3-ATP5B colocalization, indicating BNIP3-dependent mitophagy. Network pharmacology and molecular docking identified BNIP3 as a central target; siRNA-mediated BNIP3 knockdown abolished Narc's anti-ferroptotic and pro-mitophagic effects in vitro, and AAV9-driven BNIP3 silencing negated its survival and functional benefits in vivo. Together, these data establish that Narc mitigates SIMD by suppressing ferroptosis and preserving mitochondrial integrity through BNIP3-mediated mitophagy. This dual mechanism highlights Narc as a promising candidate for therapeutic intervention in sepsis-related cardiac injury.