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Daily Report

Daily Sepsis Research Analysis

10/13/2025
3 papers selected
3 analyzed

Today’s top sepsis papers span mechanistic immunometabolism, macrophage pyroptosis regulation, and large-scale AI prediction. A murine study identifies a GFAT–DRP1–calcium axis by which glutamine restores macrophage phagocytosis and survival, while another elucidates TGFBI as a suppressor of macrophage pyroptosis in septic shock. A multicenter JAMA Pediatrics study develops high-performing EHR-based models that predict pediatric sepsis within 48 hours.

Summary

Today’s top sepsis papers span mechanistic immunometabolism, macrophage pyroptosis regulation, and large-scale AI prediction. A murine study identifies a GFAT–DRP1–calcium axis by which glutamine restores macrophage phagocytosis and survival, while another elucidates TGFBI as a suppressor of macrophage pyroptosis in septic shock. A multicenter JAMA Pediatrics study develops high-performing EHR-based models that predict pediatric sepsis within 48 hours.

Research Themes

  • Immunometabolism and macrophage function in sepsis
  • Macrophage pyroptosis and epigenetic regulation in septic shock
  • AI-driven early prediction of pediatric sepsis from EHR data

Selected Articles

1. Glutamine alleviates immunosuppression in polymicrobial sepsis by augmenting bacterial phagocytosis through sustaining the GFAT-DRP1 dependent mitochondrial calcium dynamics.

82.5Level VCase-control
Clinical science (London, England : 1979) · 2025PMID: 41082631

In murine polymicrobial sepsis, glutamine supplementation restored macrophage phagocytosis, reduced bacterial burden, modulated cytokines, and improved survival, effects lost with macrophage depletion. Mechanistically, glutamine activated a dual GFAT–DRP1 program—O-GlcNAcylation-driven DRP1 oligomerization and CDK1-dependent DRP1 Ser616 phosphorylation—to enhance mitochondrial fission, mitochondrial Ca2+ efflux, and sustain cytosolic Ca2+ essential for phagocytosis.

Impact: Identifies a previously unrecognized GFAT–DRP1–calcium axis linking immunometabolism to macrophage phagocytosis in sepsis, with in vivo survival benefit. It reframes glutamine as an immunorestorative adjunct with a defined mechanism.

Clinical Implications: Suggests testing glutamine or GFAT/DRP1-targeted strategies to reverse sepsis-associated immunosuppression, with careful attention to timing, dosing, and patient selection, given prior mixed clinical results for glutamine in critical illness.

Key Findings

  • Glutamine deficiency impaired macrophage phagocytosis and worsened sepsis-induced immunosuppression; supplementation restored function and improved survival in septic mice.
  • Dual mechanism: GFAT-dependent O-GlcNAcylation promoted DRP1 oligomerization, and GFAT–CDK1 signaling induced DRP1 Ser616 phosphorylation independent of O-GlcNAc.
  • Enhanced DRP1-mediated mitochondrial fission increased mitochondrial Ca2+ efflux and sustained cytosolic Ca2+ required for phagocytosis; benefits abrogated by macrophage depletion.

Methodological Strengths

  • Integrated in vivo polymicrobial sepsis model with survival, bacterial burden, and cytokine outcomes
  • Mechanistic dissection using molecular/pharmacologic perturbations of GFAT, DRP1, O-GlcNAcylation, and CDK1 signaling

Limitations

  • Preclinical murine and in vitro data limit direct clinical generalizability
  • Prior clinical trials of glutamine in critical illness have yielded mixed or negative results, necessitating cautious translational steps

Future Directions: Prospective trials to evaluate glutamine timing/dose in immunosuppressed sepsis phenotypes; development of small-molecule modulators of the GFAT–DRP1–calcium axis with pharmacodynamic biomarkers (e.g., O-GlcNAcylation, DRP1 phosphorylation).

Sepsis triggers impaired macrophage bacterial phagocytosis, rendering the host more vulnerable to secondary infections, a manifestation termed sepsis-associated immunosuppression. Glutamine (Gln) is a vital nutrient in critical illness that not only supports energy production and biomass synthesis but also potentially exerts immunomodulatory effects. The aim of the present study was to investigate whether supplementation of Gln modulates macrophage phagocytosis and mitigates sepsis-induced immunosuppression. Using a murine model of polymicrobial sepsis, we evaluated the effects of Gln supplementation on bacterial load, cytokine production, and survival. In multiple in vitro assays, we employed molecular and pharmacological approaches to dissect Gln-dependent signaling pathways in recovering the immunosuppressive macrophages. We found that Gln deficiency impaired macrophage phagocytosis and exacerbated sepsis-induced immunosuppression. In contrast, exogenous Gln supplementation restored macrophage function and improved survival in septic mice-effects that were abolished upon macrophage depletion. Mechanistically, Gln promoted glutamine-fructose-6-phosphate transaminase (GFAT)-dependent protein O-GlcNAcylation, leading to dynamin-related protein 1 (DRP1) oligomerization. Concurrently, Gln activated a GFAT-mediated, cyclin-dependent kinase 1-dependent pathway that induced DRP1 phosphorylation at Ser-616 irrelevant of O-GlcNAcylation. These effects enhanced DRP1-mediated mitochondrial fission, increased mitochondrial calcium efflux, and sustained cytosolic calcium levels essential for phagocytosis. In conclusion, our study demonstrates that Gln strengthens macrophage phagocytosis and alleviates immunosuppression in sepsis through a dual GFAT-DRP1 mechanism co-ordinating mitochondrial dynamics and calcium signaling, highlighting the GFAT-DRP1-calcium axis as a potential therapeutic target for treating sepsis-induced immunosuppression.

2. Derivation and Validation of Predictive Models for Early Pediatric Sepsis.

77Level IIICohort
JAMA pediatrics · 2025PMID: 41082207

Across 2.3 million ED visits, gradient boosting and logistic regression models trained on the first 4 hours of EHR data predicted pediatric sepsis within 48 hours with AUROC up to 0.94. Positive likelihood ratios ranged 4–6 for sepsis and 4–6 for shock, with performance generally consistent across demographics.

Impact: Sets a new benchmark for multicenter, temporally validated EHR-based prediction of pediatric sepsis, offering deployable performance and fairness assessment to inform clinical decision support.

Clinical Implications: Supports prospective implementation trials of EHR-embedded sepsis early warning in pediatric EDs with human factors optimization, calibration to local incidence, and continuous post-deployment monitoring for safety and equity.

Key Findings

  • Gradient boosting achieved AUROC 0.94 (95% CI, 0.93–0.94) to predict sepsis within 48 hours; logistic regression AUROC 0.92.
  • Positive likelihood ratios were 4.67–6.18 for sepsis and 4.16–5.83 for septic shock; shock models had AUROC ≥0.92.
  • Key predictors included emergency severity index, age-adjusted vital signs, and medical complexity; fairness similar across demographics except better AUROC for Medicaid vs commercial payers.

Methodological Strengths

  • Very large, multicenter dataset with temporal external validation
  • Adherence to TRIPOD-AI, comparison of algorithms, and fairness assessment

Limitations

  • Retrospective EHR-based derivation; no prospective impact evaluation of clinical outcomes
  • Definition relies on PSC and EHR accuracy; generalizability beyond participating systems remains to be tested

Future Directions: Prospective, stepped-wedge trials to test outcome impact; local calibration and drift monitoring; integration with clinician workflow, rapid feedback loops, and harm-mitigation triggers.

IMPORTANCE: Sepsis is a leading cause of death in children. Early recognition and treatment improve outcomes, but predictive models have not to date improved early diagnosis. OBJECTIVE: To develop machine learning models to estimate the probability of developing sepsis in the subsequent 48 hours. DESIGN, SETTING, AND PARTICIPANTS: This was a multisite registry for model derivation and validation using electronic health record (EHR) data from January 2016 through February 2020 and temporal validation from January 2021 through December 2022. The performance of machine learning algorithms was compared to predict development of sepsis and septic shock via logistic regression, specifically ridge regression and gradient tree boosting. Five health systems contributing to the Pediatric Emergency Care Applied Research Network were included. Emergency department (ED) visits for children aged 2 months or older to less than 18 years of age excluding patients with ED disposition of death or transfer, trauma diagnosis, or sepsis present during predictive features window. The TRIPOD-AI reporting guideline was followed, and data analysis was conducted from September 2023 to July 2025. EXPOSURES: Patient and physiologic characteristics within the first 4 hours of ED care. MAIN OUTCOMES AND MEASURES: Sepsis, defined as suspected infection with a Phoenix Sepsis Criteria (PSC) score of 2 or more or death within 48 hours of ED arrival. RESULTS: The dataset included 1 604 422 eligible visits in the training cohort and 719 298 visits in the test cohort. Performance characteristics for the PSC sepsis prediction models were AUROC of 0.92 (95% CI, 0.92-0.93) for logistic regression and 0.94 (95% CI, 0.93-0.94) for gradient tree boosting. AUROCs for PSC shock models were 0.92 or greater. The gradient tree boosting models had positive likelihood ratios ranging from 4.67 (95% CI, 4.61-4.74) to 6.18 (95% CI, 6.08-6.28) for sepsis and from 4.16 (95% CI, 4.07-4.24) to 5.83 (95% CI, 5.67-5.99) for septic shock. Predictive features included emergency severity index, age-adjusted vital signs, and medical complexity. Assessment of model performance fairness was similar for all demographic characteristics except payor; AUROC for patients with Medicaid insurance was better than for those with commercial payers. CONCLUSIONS AND RELEVANCE: Using a large multicenter population, models were developed and validated with high AUROC to predict the future development of sepsis based on EHR data collected in the ED. The models achieved positive likelihood ratios to predict sepsis and septic shock. The results highlight the opportunity for future studies that combine EHR-based models with clinical judgment to improve prediction.

3. TGFBI Inhibits the Pyroptosis of Macrophages to Ameliorate Septic Shock.

75.5Level VCase-control
Journal of cellular and molecular medicine · 2025PMID: 41078093

TGFBI is downregulated in septic shock. Its overexpression suppresses non-canonical inflammasome-mediated macrophage pyroptosis, limits M1 polarization, and mitigates organ failure in CLP models. Epigenetic repression via SUV39H2 and co-activation by STAT1 reduce TGFBI; inhibiting this axis upregulates TGFBI and confers protection.

Impact: Reveals TGFBI as an immune checkpoint that restrains macrophage pyroptosis and polarization in septic shock, highlighting druggable epigenetic regulators (SUV39H2/STAT1) as targets.

Clinical Implications: Points to therapeutic strategies that boost TGFBI or inhibit SUV39H2/STAT1 to curb macrophage pyroptosis in septic shock; requires biomarker-driven stratification and careful safety evaluation.

Key Findings

  • TGFBI expression is downregulated in septic shock patients/models; overexpression suppresses non-canonical inflammasome-mediated macrophage pyroptosis and reduces organ failure.
  • TGFBI inhibits M1 macrophage polarization and enhances bacterial killing capacity.
  • SUV39H2-mediated histone methylation and STAT1 co-activation repress TGFBI; inhibiting SUV39H2/STAT1 upregulates TGFBI and confers protection in vivo.

Methodological Strengths

  • In vivo CLP septic shock model combined with comprehensive cellular assays for pyroptosis and polarization
  • Mechanistic epigenetic mapping (ChIP, histone methylation) and pathway perturbation (SUV39H2/STAT1 inhibition, genetic deficiency)

Limitations

  • Preclinical murine and cellular data without human interventional validation
  • Potential off-target effects and safety concerns with epigenetic modulators require thorough evaluation

Future Directions: Develop TGFBI agonists or SUV39H2/STAT1 inhibitors with selective myeloid targeting; validate TGFBI as a biomarker for pyroptosis-active sepsis endotypes in clinical cohorts.

Septic shock is one of the leading causes of morbidity and mortality in hospital patients. The present study aimed to investigate the potential of transforming growth factor β induced (TGFBI) in macrophage functions and progression of septic shock. Mice were treated with caecal ligation and puncture (CLP) to establish a septic shock model in vivo. Histopathologic analysis was performed using haematoxylin and eosin (HE) staining. Gene expression was detected using reverse transcription-quantitative PCR and Western blot. Cytokine release was detected using an enzyme-linked immunosorbent assay. The enrichment of TGFBI was detected using chromatin immunoprecipitation assay. Cellular functions were detected using Cell Counting Kit-8, lactate dehydrogenase, flow cytometry, PI staining, and terminal deoxynucleotidyl transferase-mediated dUTP nick end labelling staining assays. TGFBI was downregulated in septic shock patients and models. TGFBI overexpression suppressed the pyroptosis of macrophages by inhibiting the non-canonical inflammasome, promoting the bacterial killing ability of macrophages. Wedelolactone-mediated inhibition of pyroptosis alleviated sepsis-induced multiple organ failure. Moreover, TGFBI inhibited M1 macrophage polarisation. Suppressor of variegation 3-9 homologue 2 (SUV39H2)-mediated histone methylation of TGFBI, resulting in the downregulation of TGFBI. Signal transducer and activator of transcription 1 (Stat1) was identified as a new co-activator of SUV39H2 to inhibit the transcription of TGFBI. However, inhibition of SUV39H2 and Stat1 upregulated TGFBI. Furthermore, Stat1 deficiency inhibited the pyroptosis of macrophages and alleviated sepsis-induced multiple organ failure. In summary, our findings establish an immune checkpoint, whereby TGFBI, via inhibiting macrophage pyroptosis and M1 polarisation, suppresses the progression of septic shock.