Daily Sepsis Research Analysis
Mechanistic and clinical sepsis research converged on three fronts: a multi-omics/mechanistic study uncovered a PIK3C3–MAPK14 axis linking impaired autophagy to M1 macrophage polarization in sepsis-induced acute lung injury; an ICU cohort showed hyperdynamic left ventricular ejection fraction (EF ≥70%) strongly predicts 28-day mortality in septic shock; and a proteomics analysis proposed a compact two-protein panel (ANXA6 + FIBG) to predict sepsis among trauma-induced SIRS. Together, these studi
Summary
Mechanistic and clinical sepsis research converged on three fronts: a multi-omics/mechanistic study uncovered a PIK3C3–MAPK14 axis linking impaired autophagy to M1 macrophage polarization in sepsis-induced acute lung injury; an ICU cohort showed hyperdynamic left ventricular ejection fraction (EF ≥70%) strongly predicts 28-day mortality in septic shock; and a proteomics analysis proposed a compact two-protein panel (ANXA6 + FIBG) to predict sepsis among trauma-induced SIRS. Together, these studies advance pathophysiology, risk stratification, and early diagnosis.
Research Themes
- Macrophage autophagy and polarization in sepsis-induced lung injury
- Cardiac echocardiographic risk markers in septic shock
- Proteomics-based early sepsis prediction in trauma-induced SIRS
Selected Articles
1. The PIK3C3/MAPK14 axis drives M1 polarization via autophagy Inhibition to exacerbate Sepsis-Induced acute lung injury.
Integrating transcriptomics, single-cell data, molecular docking, and wet-lab validation, the study identifies a PIK3C3–MAPK14 signaling axis that impairs autophagy and drives M1 macrophage polarization in sepsis-induced ALI. PIK3C3 downregulation upregulates MAPK14, reduces autophagic flux, and promotes pro-inflammatory phenotypes, positioning this axis as a druggable target.
Impact: This work offers a coherent mechanistic pathway connecting autophagy disruption to macrophage-driven lung injury in sepsis, advancing targetable biology beyond descriptive associations.
Clinical Implications: Although preclinical, modulating the PIK3C3–MAPK14 axis could underpin therapies aiming to restore autophagy and rebalance macrophage polarization in sepsis-induced lung injury.
Key Findings
- MAPK14 was identified as a core ALI gene with increased expression localized to pro-inflammatory macrophages by single-cell analysis.
- PIK3C3 downregulation increased MAPK14, impaired autophagic flux (LC3-II/I↓, TOM20↑, P62↑, HSP60↑), and promoted M1 polarization after LPS stimulation.
- RNA pull-down captured a PIK3C3–MAPK14 complex; molecular docking showed high-affinity interaction (ΔG-bind ≈ −128 kJ/mol), suggesting a functional axis.
Methodological Strengths
- Multi-omics integration with single-cell localization and machine-learning-guided gene prioritization
- Orthogonal wet-lab validations (WB, qRT-PCR, flow cytometry, ELISA, RNA pull-down) supporting a mechanistic axis
Limitations
- Predominantly in vitro without in vivo sepsis/ALI validation
- Reliance on molecular docking and correlation analyses may not fully capture causal dynamics in complex in vivo contexts
Future Directions: Validate the axis in animal models of sepsis-induced lung injury and test pharmacologic modulators of MAPK14 or PIK3C3 to assess therapeutic efficacy and safety.
Dysregulation of macrophage autophagy plays a critical role in sepsis-induced acute lung injury (ALI); however, its underlying mechanism remains unclear. In this study, we aimed to identify the regulatory pathway involving the PIK3C3-MAPK14 signaling axis that drives ALI progression by controlling autophagy and macrophage polarization. Using machine learning transcriptomic analysis, MAPK14 was identified as a core gene associated with ALI, and multi-omics integration confirmed its upregulated expression in ALI tissues. MAPK14 localization to pro-inflammatory macrophages was determined using single-cell sequencing. Furthermore, we observed a significant positive correlation between MAPK14 and autophagy-related genes. Molecular docking and kinetic simulations revealed high-affinity interactions between PIK3C3 and MAPK14 (ΔG-bind = -127.722 ± 33.269 kJ/mol). In vitro experiments followed by Western Blot(WB) and RT-q polymerase chain reaction (PCR) assays demonstrated that lipopolysaccharide stimulation upregulated MAPK14 expression through downregulation of PIK3C3 expression, resulting in impaired autophagic flux (LC3-II/Ⅰ↓, TOM20↑, P62↑, HSP60↑). Flow cytometry and enzyme-linked immunosorbent assay (ELISA) confirmed a shift toward pro-inflammatory (M1) macrophage polarization. RNA pull-down assay directly captured the PIK3C3-MAPK14 complex, and functional validation showed that PIK3C3 overexpression significantly inhibited MAPK14 protein expression, whereas PIK3C3 knockdown enhanced it. In conclusion, targeting the PIK3C3-MAPK14 axis is a promising therapeutic strategy for ALI.
2. Hyperdynamic left ventricular ejection fraction as a predictor of mortality in intensive care unit patients with septic shock.
In a 235-patient ICU cohort with septic shock, hyperdynamic EF (≥70%) was significantly associated with 28-day mortality (OR 4.822). Age, lower mean arterial pressure, higher SOFA scores, and elevated lactate independently predicted death; male sex had higher mortality. The study was preregistered and used standardized echocardiography.
Impact: Identifies a pragmatic echocardiographic metric (hyperdynamic EF) for early risk stratification in septic shock, linking cardiac function phenotype to mortality.
Clinical Implications: Incorporating EF ≥70% as a high-risk flag could prompt closer hemodynamic monitoring, refined fluid/vasopressor strategies, and earlier consultation for cardiovascular dysfunction in sepsis.
Key Findings
- Hyperdynamic EF was more prevalent in non-survivors, strongly associated with 28-day mortality (OR 4.822, 95% CI 1.467–8.852).
- Independent mortality predictors included older age, lower mean arterial pressure, higher SOFA scores, and elevated serum lactate.
- Male patients exhibited significantly higher mortality; echocardiography was performed by accredited operators within a preregistered protocol (NCT06993948).
Methodological Strengths
- Prospective daily SOFA assessment with standardized echocardiography by accredited clinicians
- Multivariable modeling identifying independent predictors; preregistration at ClinicalTrials.gov
Limitations
- Single-center observational design limits causal inference and generalizability
- EF measurements in the context of vasopressors and dynamic preload may confound interpretation; diastolic metrics were not detailed
Future Directions: Multicenter validation and incorporation of comprehensive diastolic and deformation indices to evaluate whether hyperdynamic EF-guided management improves outcomes.
BACKGROUND: A hyperdynamic left ventricle (ejection fraction (EF) ≥70 %) on stress imaging is closely linked to diastolic dysfunction and may indicate heart failure with preserved EF (HFpEF) in the right clinical context. OBJECTIVES: To investigate the underlying causes and prognostic implications of hyperdynamic left ventricular ejection fraction (HDLVEF) in critically ill patients diagnosed with sepsis. METHODS: A total of 235 patients diagnosed with septic shock and admitted to the intensive care unit were included in this study. Diagnosis of sepsis was established based on the sequential organ failure assessment (SOFA) score, which was calculated upon admission and updated every 24 h using the worst values from the prior day. Transthoracic echocardiography (TTE) was performed either by the principal investigator or a certified cardiologist accredited by the Egyptian Medical Society of Echocardiography (EMSE). RESULTS: Among the 235 patients, 88 (37.4 %) died within 28 days, while 147 (62.6 %) survived. Hyperdynamic EF was significantly more prevalent in the deceased group compared to survivors, with an odds ratio of 4.822 (95 % CI: 1.467-8.852), indicating a strong association with mortality. Multivariate analysis identified several independent predictors of mortality, including older age, lower mean arterial pressure, higher SOFA scores, and elevated serum lactate levels. Additionally, the mortality rate was significantly higher among male patients. CONCLUSION: HDLVEF holds significant prognostic value in patients with sepsis in critical care. It may serve as a valuable early echocardiographic marker of sepsis-induced cardiomyopathy or cardiovascular dysfunction, potentially aiding in risk assessment and early therapeutic decisions. TRIAL REGISTRATION: The trial was registered before patient enrolment at ClinicalTrials.gov (ID/ NCT06993948).
3. Identifying Predictive Biomarkers for Sepsis in Trauma-Induced Systemic Inflammatory Response Syndrome Using Proteomics Data.
Retrospective analysis of plasma proteomics from 62 severe trauma patients identified 15 proteins distinguishing SIRS patients who developed sepsis versus those who did not. A minimal two-protein panel (ANXA6 + FIBG) achieved high predictive performance (AUC 0.9652), suggesting a feasible early risk stratification tool.
Impact: Proposes a compact biomarker panel with excellent discrimination to flag high-risk trauma patients before overt sepsis, potentially enabling earlier prevention and intervention.
Clinical Implications: If validated prospectively, an ANXA6+FIBG assay could guide targeted monitoring, antibiotic stewardship, and preemptive supportive care in trauma-induced SIRS.
Key Findings
- Identified 15 differentially expressed proteins between SIRS patients who developed sepsis (n=15) and those who did not (n=23).
- Top single markers showed strong discrimination: ANXA6 (AUC 0.881), FA12 (0.873), TRY2 (0.868), FIBG (0.759), DOPD (0.745).
- A two-protein panel (ANXA6 + FIBG) balanced parsimony and performance with AUC 0.9652; a five-marker combination reached AUC 0.9913.
Methodological Strengths
- Unbiased proteomics with ROC/AUC-based evaluation and model parsimony optimization
- Clear case definition within trauma-induced SIRS enabling clinically relevant comparison
Limitations
- Small, retrospective single-cohort analysis without external validation increases overfitting risk
- Timing of sampling and calibration/clinical utility metrics (e.g., decision-curve analysis) not reported
Future Directions: Prospective multicenter validation, assay development with clinical lab platforms, and assessment of clinical impact via decision-curve and implementation studies.
INTRODUCTION: Despite advances in surveillance, protocolized resuscitation, and critical care organ support, sepsis remains a common and fatal complication in trauma. Trauma-induced systemic inflammatory response syndrome (SIRS) can mask the occurrence of sepsis, complicating the diagnosis of sepsis. Thus, it is significant to identify high-risk patients of sepsis among trauma-induced SIRS for early prevention, early diagnosis, and early intervention of sepsis. This study seeks to identify predictive biomarkers for sepsis in patients with trauma-induced SIRS. MATERIALS AND METHODS: The existing plasma proteomics data from 62 severe trauma patients with (38 cases) and without (24 cases) SIRS were retrospectively analyzed. Among the 38 patients with SIRS, 15 SIRS patients who subsequently developed sepsis (SDS) were assigned to SDS group, while the remaining 23 SIRS patients who did not develop sepsis (SDDS) constituted SDDS group. By comparing the SDS and SDDS groups, predictive biomarkers for sepsis in trauma-induced SIRS were identified. RESULTS: Fifteen differentially expressed proteins were identified between SDS and SDDS groups. We screened top 5 differentially expressed proteins as predictive biomarkers for sepsis in trauma-induced SIRS, including ANXA6 (area under the curve [AUC] = 0.881), FA12 (AUC = 0.873), TRY2 (AUC = 0.868), FIBG (AUC = 0.759), and DOPD (AUC = 0.745). The combined predictive performance of these biomarkers is better (AUC = 0.9913). To balance robust predictive performance with a minimal panel size, we developed a panel consisting of ANXA6 and FIBG, which demonstrated superior predictive performance (AUC = 0.9652). CONCLUSIONS: This study identified predictive biomarkers for sepsis in trauma-induced SIRS. Notably, integrating coagulation and inflammatory markers enabled substantial reduction in the number of required modeling indicators while preserving superior diagnostic performance. These findings offer new insights into developing early predictive panels.